IL_3J7R_194

3D structure

PDB id

3J7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the translating mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GCG*CCC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J7R_194 not in the Motif Atlas

Homologous match to IL_8P9A_408

Geometric discrepancy: 0.4621

The information below is about IL_8P9A_408

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_44465.1

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

9

Unit IDs

3J7R|1|S2|G|694
3J7R|1|S2|C|695
3J7R|1|S2|G|696
*
3J7R|1|S2|C|734
3J7R|1|S2|C|735
3J7R|1|S2|C|736

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SH

Ribosomal protein eS7

Chain SW

Ribosomal protein uS8