IL_3J7R_260
3D structure
- PDB id
- 3J7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the translating mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- AUUAGAGGUCUUGG*UCAACCUAUUCU
- Length
- 26 nucleotides
- Bulged bases
- 3J7R|1|5|U|1754, 3J7R|1|5|C|1755
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J7R|1|5|A|1746
3J7R|1|5|U|1747
3J7R|1|5|U|1748
3J7R|1|5|A|1749
3J7R|1|5|G|1750
3J7R|1|5|A|1751
3J7R|1|5|G|1752
3J7R|1|5|G|1753
3J7R|1|5|U|1754
3J7R|1|5|C|1755
3J7R|1|5|U|1756
3J7R|1|5|U|1757
3J7R|1|5|G|1758
3J7R|1|5|G|1759
*
3J7R|1|5|U|1773
3J7R|1|5|C|1774
3J7R|1|5|A|1775
3J7R|1|5|A|1776
3J7R|1|5|C|1777
3J7R|1|5|C|1778
3J7R|1|5|U|1779
3J7R|1|5|A|1780
3J7R|1|5|U|1781
3J7R|1|5|U|1782
3J7R|1|5|C|1783
3J7R|1|5|U|1784
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 7
- 5S ribosomal RNA; 5S rRNA
- Chain D
- Ribosomal protein uL18
- Chain I
- Ribosomal protein uL16
- Chain S5
- Transfer RNA; tRNA
Coloring options: