3D structure

PDB id
3J7R (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the translating mammalian ribosome-Sec61 complex
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
UAAGG*CGACUUA
Length
12 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J7R|1|5|U|2893
3J7R|1|5|A|2894
3J7R|1|5|A|2895
3J7R|1|5|G|2896
3J7R|1|5|G|2897
*
3J7R|1|5|C|3602
3J7R|1|5|G|3603
3J7R|1|5|A|3604
3J7R|1|5|C|3605
3J7R|1|5|U|3606
3J7R|1|5|U|3607
3J7R|1|5|A|3608

Current chains

Chain 5
28S ribosomal RNA

Nearby chains

Chain R
Ribosomal protein eL19
Chain SI
Ribosomal protein eS8

Coloring options:

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