IL_3J7R_289

3D structure

PDB id

3J7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the translating mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UCCUUUG*CAUUCG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J7R|1|S2|U|116
3J7R|1|S2|C|117
3J7R|1|S2|C|118
3J7R|1|S2|U|119
3J7R|1|S2|U|120
3J7R|1|S2|U|121
3J7R|1|S2|G|122
*
3J7R|1|S2|C|342
3J7R|1|S2|A|343
3J7R|1|S2|U|344
3J7R|1|S2|U|345
3J7R|1|S2|C|346
3J7R|1|S2|G|347

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SE

Ribosomal protein eS4

Chain SI

Ribosomal protein eS8