IL_3J7R_291

3D structure

PDB id

3J7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the translating mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CUAUCAA*UGACCACGG

Length

16 nucleotides

Bulged bases

3J7R|1|S2|U|361, 3J7R|1|S2|C|399

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J7R|1|S2|C|358
3J7R|1|S2|U|359
3J7R|1|S2|A|360
3J7R|1|S2|U|361
3J7R|1|S2|C|362
3J7R|1|S2|A|363
3J7R|1|S2|A|364
*
3J7R|1|S2|U|396
3J7R|1|S2|G|397
3J7R|1|S2|A|398
3J7R|1|S2|C|399
3J7R|1|S2|C|400
3J7R|1|S2|A|401
3J7R|1|S2|C|402
3J7R|1|S2|G|403
3J7R|1|S2|G|404

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SI

Ribosomal protein eS8

Chain SL

Ribosomal protein uS17

Chain SX

Ribosomal protein uS12