IL_3J7R_294
3D structure
- PDB id
- 3J7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the translating mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- AG*CGCGGUAAUUCCAGCU
- Length
- 18 nucleotides
- Bulged bases
- 3J7R|1|S2|G|626, 3J7R|1|S2|U|627, 3J7R|1|S2|A|628, 3J7R|1|S2|U|630
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J7R|1|S2|A|599
3J7R|1|S2|G|600
*
3J7R|1|S2|C|622
3J7R|1|S2|G|623
3J7R|1|S2|C|624
3J7R|1|S2|G|625
3J7R|1|S2|G|626
3J7R|1|S2|U|627
3J7R|1|S2|A|628
3J7R|1|S2|A|629
3J7R|1|S2|U|630
3J7R|1|S2|U|631
3J7R|1|S2|C|632
3J7R|1|S2|C|633
3J7R|1|S2|A|634
3J7R|1|S2|G|635
3J7R|1|S2|C|636
3J7R|1|S2|U|637
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain S4
- Messenger RNA
- Chain S5
- Transfer RNA; tRNA
- Chain SD
- Ribosomal protein uS3
- Chain SX
- Ribosomal protein uS12
- Chain Se
- Ribosomal protein eS30
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