IL_3J7Z_011

3D structure

PDB id

3J7Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli 50S subunit with ErmCL nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J7Z_011 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.2355

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

3J7Z|1|A|C|274
3J7Z|1|A|C|275
3J7Z|1|A|U|276
3J7Z|1|A|G|277
3J7Z|1|A|A|278
3J7Z|1|A|A|279
3J7Z|1|A|U|280
3J7Z|1|A|C|281
*
3J7Z|1|A|G|359
3J7Z|1|A|U|360
3J7Z|1|A|G|361
3J7Z|1|A|A|362
3J7Z|1|A|G|363

Current chains

Chain A

23S rRNA

Nearby chains