IL_3J7Z_060

3D structure

PDB id

3J7Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli 50S subunit with ErmCL nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UGUAGG*CUGAGG

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J7Z_060 not in the Motif Atlas

Geometric match to IL_8ZA4_003

Geometric discrepancy: 0.3397

The information below is about IL_8ZA4_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_35186.2

Basepair signature

cWW-tSH-tHW-L-R-cWW-cWW

Number of instances in this motif group

6

Unit IDs

3J7Z|1|A|U|1474
3J7Z|1|A|G|1475
3J7Z|1|A|U|1476
3J7Z|1|A|A|1477
3J7Z|1|A|G|1478
3J7Z|1|A|G|1479
*
3J7Z|1|A|C|1512
3J7Z|1|A|U|1513
3J7Z|1|A|G|1514
3J7Z|1|A|A|1515
3J7Z|1|A|G|1516
3J7Z|1|A|G|1517

Current chains

Chain A

23S rRNA

Nearby chains