IL_3J7Z_068

3D structure

PDB id

3J7Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli 50S subunit with ErmCL nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CGUAAC*GGAGAAG

Length

13 nucleotides

Bulged bases

3J7Z|1|A|G|1699

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J7Z_068 not in the Motif Atlas

Homologous match to IL_5J7L_308

Geometric discrepancy: 0.0651

The information below is about IL_5J7L_308

Detailed Annotation

tSH-tSH-tHH-tHS

Broad Annotation

No text annotation

Motif group

IL_47346.2

Basepair signature

cWW-tSH-L-R-tHH-tHS-cWW

Number of instances in this motif group

7

Unit IDs

3J7Z|1|A|C|1686
3J7Z|1|A|G|1687
3J7Z|1|A|U|1688
3J7Z|1|A|A|1689
3J7Z|1|A|A|1690
3J7Z|1|A|C|1691
*
3J7Z|1|A|G|1696
3J7Z|1|A|G|1697
3J7Z|1|A|A|1698
3J7Z|1|A|G|1699
3J7Z|1|A|A|1700
3J7Z|1|A|A|1701
3J7Z|1|A|G|1702

Current chains

Chain A

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2