IL_3J7Z_119

3D structure

PDB id

3J7Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli 50S subunit with ErmCL nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CCC*GCGG

Length

7 nucleotides

Bulged bases

3J7Z|1|A|C|1732

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J7Z_119 not in the Motif Atlas

Geometric match to IL_7MLW_001

Geometric discrepancy: 0.2828

The information below is about IL_7MLW_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

3J7Z|1|A|C|1726
3J7Z|1|A|C|1727
3J7Z|1|A|C|1728
*
3J7Z|1|A|G|1731
3J7Z|1|A|C|1732
3J7Z|1|A|G|1733
3J7Z|1|A|G|1734

Current chains

Chain A

23S rRNA

Nearby chains