IL_3J9Y_009

3D structure

PDB id

3J9Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CCUGAAUCA*UGUGAG

Length

15 nucleotides

Bulged bases

3J9Y|1|A|G|277

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J9Y|1|A|C|274
3J9Y|1|A|C|275
3J9Y|1|A|U|276
3J9Y|1|A|G|277
3J9Y|1|A|A|278
3J9Y|1|A|A|279
3J9Y|1|A|U|280
3J9Y|1|A|C|281
3J9Y|1|A|A|282
*
3J9Y|1|A|U|358
3J9Y|1|A|G|359
3J9Y|1|A|U|360
3J9Y|1|A|G|361
3J9Y|1|A|A|362
3J9Y|1|A|G|363

Current chains

Chain A

23S ribosomal RNA

Nearby chains