IL_3J9Y_056

3D structure

PDB id

3J9Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UGUAGG*CUGAGG

Length

12 nucleotides

Bulged bases

3J9Y|1|A|G|1475

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J9Y|1|A|U|1474
3J9Y|1|A|G|1475
3J9Y|1|A|U|1476
3J9Y|1|A|A|1477
3J9Y|1|A|G|1478
3J9Y|1|A|G|1479
*
3J9Y|1|A|C|1512
3J9Y|1|A|U|1513
3J9Y|1|A|G|1514
3J9Y|1|A|A|1515
3J9Y|1|A|G|1516
3J9Y|1|A|G|1517

Current chains

Chain A

23S ribosomal RNA

Nearby chains