IL_3J9Y_166

3D structure

PDB id

3J9Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

AUACAAAG*CAUAAAGU

Length

16 nucleotides

Bulged bases

3J9Y|1|a|U|1286

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J9Y|1|a|A|1246
3J9Y|1|a|U|1247
3J9Y|1|a|A|1248
3J9Y|1|a|C|1249
3J9Y|1|a|A|1250
3J9Y|1|a|A|1251
3J9Y|1|a|A|1252
3J9Y|1|a|G|1253
*
3J9Y|1|a|C|1284
3J9Y|1|a|A|1285
3J9Y|1|a|U|1286
3J9Y|1|a|A|1287
3J9Y|1|a|A|1288
3J9Y|1|a|A|1289
3J9Y|1|a|G|1290
3J9Y|1|a|U|1291

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain g

30S ribosomal protein S7

Chain i

30S ribosomal protein S9

Chain j

30S ribosomal protein S10

Chain n

30S ribosomal protein S14