IL_3JAG_026

3D structure

PDB id

3JAG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

AUUCAAC*GCGCAUU

Length

14 nucleotides

Bulged bases

3JAG|1|5|A|686

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAG|1|5|A|466
3JAG|1|5|U|467
3JAG|1|5|U|468
3JAG|1|5|C|469
3JAG|1|5|A|470
3JAG|1|5|A|471
3JAG|1|5|C|472
*
3JAG|1|5|G|682
3JAG|1|5|C|683
3JAG|1|5|G|684
3JAG|1|5|C|685
3JAG|1|5|A|686
3JAG|1|5|U|687
3JAG|1|5|U|688

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain E

eL6

Chain r

eL28