IL_3JAG_041

3D structure

PDB id

3JAG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

GAAGGUGGC*GUGUUACAGC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAG|1|5|G|745
3JAG|1|5|A|746
3JAG|1|5|A|747
3JAG|1|5|G|748
3JAG|1|5|G|749
3JAG|1|5|U|750
3JAG|1|5|G|751
3JAG|1|5|G|752
3JAG|1|5|C|753
*
3JAG|1|5|G|910
3JAG|1|5|U|911
3JAG|1|5|G|912
3JAG|1|5|U|913
3JAG|1|5|U|914
3JAG|1|5|A|915
3JAG|1|5|C|916
3JAG|1|5|A|917
3JAG|1|5|G|918
3JAG|1|5|C|919

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain H

uL6

Chain M

eL14

Chain S

eL20