IL_3JAG_066

3D structure

PDB id

3JAG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

CUCGCACACGCAGU*AAUGG

Length

19 nucleotides

Bulged bases

3JAG|1|5|G|1697, 3JAG|1|5|C|1698, 3JAG|1|5|A|1699, 3JAG|1|5|C|1718, 3JAG|1|5|A|1719, 3JAG|1|5|G|1724

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAG|1|5|C|1694
3JAG|1|5|U|1695
3JAG|1|5|C|1696
3JAG|1|5|G|1697
3JAG|1|5|C|1698
3JAG|1|5|A|1699
3JAG|1|5|C|1718
3JAG|1|5|A|1719
3JAG|1|5|C|1720
3JAG|1|5|G|1721
3JAG|1|5|C|1722
3JAG|1|5|A|1723
3JAG|1|5|G|1724
3JAG|1|5|U|1725
*
3JAG|1|5|A|1837
3JAG|1|5|A|1838
3JAG|1|5|U|1839
3JAG|1|5|G|1840
3JAG|1|5|G|1842

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain C

uL4

Chain F

uL30

Chain Q

eL18

Chain T

eL21

Chain b

eL29