IL_3JAG_253

3D structure

PDB id

3JAG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

GUGCCUACC*GUAACC

Length

15 nucleotides

Bulged bases

3JAG|1|9|C|1554, 3JAG|1|9|A|1580

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAG|1|9|G|1550
3JAG|1|9|U|1551
3JAG|1|9|G|1552
3JAG|1|9|C|1553
3JAG|1|9|C|1554
3JAG|1|9|U|1555
3JAG|1|9|A|1556
3JAG|1|9|C|1557
3JAG|1|9|C|1558
*
3JAG|1|9|G|1577
3JAG|1|9|U|1578
3JAG|1|9|A|1579
3JAG|1|9|A|1580
3JAG|1|9|C|1581
3JAG|1|9|C|1582

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain DD

uS3

Chain KK

eS10

Chain UU

uS10

Chain dd

uS14