3D structure

PDB id
3JAG (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon
Experimental method
ELECTRON MICROSCOPY
Resolution
3.65 Å

Loop

Sequence
CGAAU*ACAUGUG
Length
12 nucleotides
Bulged bases
3JAG|1|5|G|119, 3JAG|1|5|U|150
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3JAG|1|5|C|118
3JAG|1|5|G|119
3JAG|1|5|A|120
3JAG|1|5|A|121
3JAG|1|5|U|122
*
3JAG|1|5|A|147
3JAG|1|5|C|148
3JAG|1|5|A|149
3JAG|1|5|U|150
3JAG|1|5|G|151
3JAG|1|5|U|152
3JAG|1|5|G|153

Current chains

Chain 5
28S ribosomal RNA

Nearby chains

Chain 8
5.8S ribosomal RNA; 5.8S rRNA
Chain G
eL8
Chain N
eL15
Chain h
uL29

Coloring options:

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