IL_3JAG_275
3D structure
- PDB id
- 3JAG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.65 Å
Loop
- Sequence
- CAGUCGAGAGUGGACGGGAGCGGCGGGGGCGGCGCGCGCGCG*CCCCCGGAGCCCCGCGGACGCUACG
- Length
- 67 nucleotides
- Bulged bases
- 3JAG|1|5|G|2094, 3JAG|1|5|G|2111, 3JAG|1|5|G|2114, 3JAG|1|5|G|2115, 3JAG|1|5|C|2116, 3JAG|1|5|G|2117, 3JAG|1|5|G|2118, 3JAG|1|5|C|2119, 3JAG|1|5|G|2122, 3JAG|1|5|C|2123, 3JAG|1|5|G|2124, 3JAG|1|5|C|2247, 3JAG|1|5|C|2256, 3JAG|1|5|G|2259, 3JAG|1|5|C|2266, 3JAG|1|5|U|2267, 3JAG|1|5|C|2269
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JAG|1|5|C|2087
3JAG|1|5|A|2088
3JAG|1|5|G|2089
3JAG|1|5|U|2090
3JAG|1|5|C|2091
3JAG|1|5|G|2092
3JAG|1|5|A|2093
3JAG|1|5|G|2094
3JAG|1|5|A|2095
3JAG|1|5|G|2096
3JAG|1|5|U|2097
3JAG|1|5|G|2098
3JAG|1|5|G|2099
3JAG|1|5|A|2100
3JAG|1|5|C|2101
3JAG|1|5|G|2102
3JAG|1|5|G|2103
3JAG|1|5|G|2104
3JAG|1|5|A|2105
3JAG|1|5|G|2106
3JAG|1|5|C|2107
3JAG|1|5|G|2108
3JAG|1|5|G|2109
3JAG|1|5|C|2110
3JAG|1|5|G|2111
3JAG|1|5|G|2112
3JAG|1|5|G|2113
3JAG|1|5|G|2114
3JAG|1|5|G|2115
3JAG|1|5|C|2116
3JAG|1|5|G|2117
3JAG|1|5|G|2118
3JAG|1|5|C|2119
3JAG|1|5|G|2120
3JAG|1|5|C|2121
3JAG|1|5|G|2122
3JAG|1|5|C|2123
3JAG|1|5|G|2124
3JAG|1|5|C|2125
3JAG|1|5|G|2126
3JAG|1|5|C|2127
3JAG|1|5|G|2128
*
3JAG|1|5|C|2246
3JAG|1|5|C|2247
3JAG|1|5|C|2248
3JAG|1|5|C|2249
3JAG|1|5|C|2250
3JAG|1|5|G|2251
3JAG|1|5|G|2252
3JAG|1|5|A|2253
3JAG|1|5|G|2254
3JAG|1|5|C|2255
3JAG|1|5|C|2256
3JAG|1|5|C|2257
3JAG|1|5|C|2258
3JAG|1|5|G|2259
3JAG|1|5|C|2260
3JAG|1|5|G|2261
3JAG|1|5|G|2262
3JAG|1|5|A|2263
3JAG|1|5|C|2264
3JAG|1|5|G|2265
3JAG|1|5|C|2266
3JAG|1|5|U|2267
3JAG|1|5|A|2268
3JAG|1|5|C|2269
3JAG|1|5|G|2270
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain C
- uL4
- Chain E
- eL6
- Chain F
- uL30
- Chain Q
- eL18
- Chain r
- eL28
Coloring options: