IL_3JAG_282
3D structure
- PDB id
- 3JAG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.65 Å
Loop
- Sequence
- UAUUG*CAAGA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JAG_282 not in the Motif Atlas
- Geometric match to IL_4LFB_065
- Geometric discrepancy: 0.3433
- The information below is about IL_4LFB_065
- Detailed Annotation
- Triple non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_49751.4
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
3JAG|1|9|U|943
3JAG|1|9|A|944
3JAG|1|9|U|945
3JAG|1|9|U|946
3JAG|1|9|G|947
*
3JAG|1|9|C|979
3JAG|1|9|A|980
3JAG|1|9|A|981
3JAG|1|9|G|982
3JAG|1|9|A|983
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain A
- uL2
- Chain BB
- eS1
- Chain OO
- uS11
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