IL_3JAH_015

3D structure

PDB id

3JAH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.45 Å

Loop

Sequence

GUC*GC

Length

5 nucleotides

Bulged bases

3JAH|1|5|U|200

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3JAH_015 not in the Motif Atlas

Homologous match to IL_8C3A_013

Geometric discrepancy: 0.2316

The information below is about IL_8C3A_013

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_83039.19

Basepair signature

cWW-L-cWW

Number of instances in this motif group

123

Unit IDs

3JAH|1|5|G|199
3JAH|1|5|U|200
3JAH|1|5|C|201
*
3JAH|1|5|G|214
3JAH|1|5|C|215

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain Y

uL24