IL_3JAH_066

3D structure

PDB id

3JAH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.45 Å

Loop

Sequence

CUCGCACACGCAGU*AAUGG

Length

19 nucleotides

Bulged bases

3JAH|1|5|G|1697, 3JAH|1|5|C|1698, 3JAH|1|5|A|1699, 3JAH|1|5|C|1718, 3JAH|1|5|A|1719, 3JAH|1|5|G|1724

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAH|1|5|C|1694
3JAH|1|5|U|1695
3JAH|1|5|C|1696
3JAH|1|5|G|1697
3JAH|1|5|C|1698
3JAH|1|5|A|1699
3JAH|1|5|C|1718
3JAH|1|5|A|1719
3JAH|1|5|C|1720
3JAH|1|5|G|1721
3JAH|1|5|C|1722
3JAH|1|5|A|1723
3JAH|1|5|G|1724
3JAH|1|5|U|1725
*
3JAH|1|5|A|1837
3JAH|1|5|A|1838
3JAH|1|5|U|1839
3JAH|1|5|G|1840
3JAH|1|5|G|1842

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain C

uL4

Chain F

uL30

Chain Q

uL14

Chain T

eL21

Chain b

eL29