IL_3JAH_158

3D structure

PDB id

3JAH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.45 Å

Loop

Sequence

GCCUCGGAUAGC*GUGCGGAGUGC

Length

23 nucleotides

Bulged bases

3JAH|1|5|C|4756, 3JAH|1|5|C|4757, 3JAH|1|5|U|4763, 3JAH|1|5|C|4871, 3JAH|1|5|A|4874, 3JAH|1|5|G|4877

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAH|1|5|G|4755
3JAH|1|5|C|4756
3JAH|1|5|C|4757
3JAH|1|5|U|4758
3JAH|1|5|C|4759
3JAH|1|5|G|4760
3JAH|1|5|G|4761
3JAH|1|5|A|4762
3JAH|1|5|U|4763
3JAH|1|5|A|4764
3JAH|1|5|G|4765
3JAH|1|5|C|4766
*
3JAH|1|5|G|4868
3JAH|1|5|U|4869
3JAH|1|5|G|4870
3JAH|1|5|C|4871
3JAH|1|5|G|4872
3JAH|1|5|G|4873
3JAH|1|5|A|4874
3JAH|1|5|G|4875
3JAH|1|5|U|4876
3JAH|1|5|G|4877
3JAH|1|5|C|4878

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain E

eL6

Chain H

uL6

Chain M

eL14

Chain O

uL13

Chain S

eL20