3D structure

PDB id
3JAH (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codon
Experimental method
ELECTRON MICROSCOPY
Resolution
3.45 Å

Loop

Sequence
GACAGGAUUGACAGA*UCUUUCUCGAUUC
Length
28 nucleotides
Bulged bases
3JAH|1|9|C|1283, 3JAH|1|9|G|1285, 3JAH|1|9|U|1288, 3JAH|1|9|C|1292
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3JAH|1|9|G|1281
3JAH|1|9|A|1282
3JAH|1|9|C|1283
3JAH|1|9|A|1284
3JAH|1|9|G|1285
3JAH|1|9|G|1286
3JAH|1|9|A|1287
3JAH|1|9|U|1288
3JAH|1|9|U|1289
3JAH|1|9|G|1290
3JAH|1|9|A|1291
3JAH|1|9|C|1292
3JAH|1|9|A|1293
3JAH|1|9|G|1294
3JAH|1|9|A|1295
*
3JAH|1|9|U|1304
3JAH|1|9|C|1305
3JAH|1|9|U|1306
3JAH|1|9|U|1307
3JAH|1|9|U|1308
3JAH|1|9|C|1309
3JAH|1|9|U|1310
3JAH|1|9|C|1311
3JAH|1|9|G|1312
3JAH|1|9|A|1313
3JAH|1|9|U|1314
3JAH|1|9|U|1315
3JAH|1|9|C|1316

Current chains

Chain 9
18S ribosomal RNA

Nearby chains

Chain KK
eS10
Chain MM
eS12
Chain PP
uS19
Chain dd
uS14
Chain ff
eS31

Coloring options:

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