3D structure

PDB id
3JAH (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codon
Experimental method
ELECTRON MICROSCOPY
Resolution
3.45 Å

Loop

Sequence
GCUCAGCGUG*CCGUUGAACCC
Length
21 nucleotides
Bulged bases
3JAH|1|9|U|1585, 3JAH|1|9|G|1587
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3JAH|1|9|G|1541
3JAH|1|9|C|1542
3JAH|1|9|U|1543
3JAH|1|9|C|1544
3JAH|1|9|A|1545
3JAH|1|9|G|1546
3JAH|1|9|C|1547
3JAH|1|9|G|1548
3JAH|1|9|U|1549
3JAH|1|9|G|1550
*
3JAH|1|9|C|1582
3JAH|1|9|C|1583
3JAH|1|9|G|1584
3JAH|1|9|U|1585
3JAH|1|9|U|1586
3JAH|1|9|G|1587
3JAH|1|9|A|1588
3JAH|1|9|A|1589
3JAH|1|9|C|1590
3JAH|1|9|C|1591
3JAH|1|9|C|1592

Current chains

Chain 9
18S ribosomal RNA

Nearby chains

Chain DD
uS3
Chain FF
uS7
Chain QQ
uS9
Chain TT
eS19
Chain UU
uS10
Chain ZZ
eS25
Chain dd
uS14

Coloring options:

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