IL_3JAI_064

3D structure

PDB id

3JAI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

CUCGCACACGCAGU*AAUGG

Length

19 nucleotides

Bulged bases

3JAI|1|5|G|1697, 3JAI|1|5|C|1698, 3JAI|1|5|A|1699, 3JAI|1|5|C|1718, 3JAI|1|5|A|1719, 3JAI|1|5|G|1724

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAI|1|5|C|1694
3JAI|1|5|U|1695
3JAI|1|5|C|1696
3JAI|1|5|G|1697
3JAI|1|5|C|1698
3JAI|1|5|A|1699
3JAI|1|5|C|1718
3JAI|1|5|A|1719
3JAI|1|5|C|1720
3JAI|1|5|G|1721
3JAI|1|5|C|1722
3JAI|1|5|A|1723
3JAI|1|5|G|1724
3JAI|1|5|U|1725
*
3JAI|1|5|A|1837
3JAI|1|5|A|1838
3JAI|1|5|U|1839
3JAI|1|5|G|1840
3JAI|1|5|G|1842

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain C

uL4

Chain F

uL30

Chain Q

eL18

Chain T

eL21

Chain b

eL29