IL_3JAI_077

3D structure

PDB id

3JAI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

CCG*CG

Length

5 nucleotides

Bulged bases

3JAI|1|5|C|1921

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3JAI_077 not in the Motif Atlas

Homologous match to IL_8GLP_078

Geometric discrepancy: 0.1542

The information below is about IL_8GLP_078

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05642.5

Basepair signature

cWW-L-cWW

Number of instances in this motif group

67

Unit IDs

3JAI|1|5|C|1920
3JAI|1|5|C|1921
3JAI|1|5|G|1922
*
3JAI|1|5|C|2062
3JAI|1|5|G|2063

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain F

uL30

Chain M

eL14

Chain O

uL13

Chain S

eL20

Chain f

eL33