IL_3JAI_236

3D structure

PDB id

3JAI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

GACAGGAUUGA*UUCUCGAUUC

Length

21 nucleotides

Bulged bases

3JAI|1|9|C|1283, 3JAI|1|9|G|1285

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAI|1|9|G|1281
3JAI|1|9|A|1282
3JAI|1|9|C|1283
3JAI|1|9|A|1284
3JAI|1|9|G|1285
3JAI|1|9|G|1286
3JAI|1|9|A|1287
3JAI|1|9|U|1288
3JAI|1|9|U|1289
3JAI|1|9|G|1290
3JAI|1|9|A|1291
*
3JAI|1|9|U|1307
3JAI|1|9|U|1308
3JAI|1|9|C|1309
3JAI|1|9|U|1310
3JAI|1|9|C|1311
3JAI|1|9|G|1312
3JAI|1|9|A|1313
3JAI|1|9|U|1314
3JAI|1|9|U|1315
3JAI|1|9|C|1316

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain KK

eS10

Chain MM

eS12

Chain dd

uS14

Chain ff

eS31