3D structure

PDB id
3JAI (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon
Experimental method
ELECTRON MICROSCOPY
Resolution
3.65 Å

Loop

Sequence
AACUA*UUCU
Length
9 nucleotides
Bulged bases
3JAI|1|9|C|1403, 3JAI|1|9|U|1404
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3JAI|1|9|A|1401
3JAI|1|9|A|1402
3JAI|1|9|C|1403
3JAI|1|9|U|1404
3JAI|1|9|A|1405
*
3JAI|1|9|U|1441
3JAI|1|9|U|1442
3JAI|1|9|C|1443
3JAI|1|9|U|1444

Current chains

Chain 9
18S ribosomal RNA

Nearby chains

Chain QQ
uS9
Chain UU
uS10
Chain gg
RACK1

Coloring options:

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