IL_3JAI_280

3D structure

PDB id

3JAI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

UAUCAAC*GUGACCACG

Length

16 nucleotides

Bulged bases

3JAI|1|9|U|361, 3JAI|1|9|C|399, 3JAI|1|9|C|400

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAI|1|9|U|359
3JAI|1|9|A|360
3JAI|1|9|U|361
3JAI|1|9|C|362
3JAI|1|9|A|363
3JAI|1|9|A|364
3JAI|1|9|C|365
*
3JAI|1|9|G|395
3JAI|1|9|U|396
3JAI|1|9|G|397
3JAI|1|9|A|398
3JAI|1|9|C|399
3JAI|1|9|C|400
3JAI|1|9|A|401
3JAI|1|9|C|402
3JAI|1|9|G|403

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain 5

Large subunit ribosomal RNA; LSU rRNA

Chain II

eS8

Chain LL

uS17

Chain XX

uS12