3D structure

PDB id
3JAI (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon
Experimental method
ELECTRON MICROSCOPY
Resolution
3.65 Å

Loop

Sequence
GCUCAGCGUG*CCGUUGAACCC
Length
21 nucleotides
Bulged bases
3JAI|1|9|U|1585, 3JAI|1|9|G|1587
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3JAI|1|9|G|1541
3JAI|1|9|C|1542
3JAI|1|9|U|1543
3JAI|1|9|C|1544
3JAI|1|9|A|1545
3JAI|1|9|G|1546
3JAI|1|9|C|1547
3JAI|1|9|G|1548
3JAI|1|9|U|1549
3JAI|1|9|G|1550
*
3JAI|1|9|C|1582
3JAI|1|9|C|1583
3JAI|1|9|G|1584
3JAI|1|9|U|1585
3JAI|1|9|U|1586
3JAI|1|9|G|1587
3JAI|1|9|A|1588
3JAI|1|9|A|1589
3JAI|1|9|C|1590
3JAI|1|9|C|1591
3JAI|1|9|C|1592

Current chains

Chain 9
18S ribosomal RNA

Nearby chains

Chain DD
uS3
Chain FF
uS7
Chain QQ
uS9
Chain TT
eS19
Chain UU
uS10
Chain ZZ
eS25
Chain dd
uS14

Coloring options:

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