IL_3JAI_287
3D structure
- PDB id
- 3JAI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.65 Å
Loop
- Sequence
- CCC*GAGCG
- Length
- 8 nucleotides
- Bulged bases
- 3JAI|1|9|C|1783
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JAI_287 not in the Motif Atlas
- Geometric match to IL_4V9F_028
- Geometric discrepancy: 0.3347
- The information below is about IL_4V9F_028
- Detailed Annotation
- Major groove platform with extra cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_51387.2
- Basepair signature
- cWW-cSH-cWW-cWW
- Number of instances in this motif group
- 20
Unit IDs
3JAI|1|9|C|1750
3JAI|1|9|C|1751
3JAI|1|9|C|1752
*
3JAI|1|9|G|1780
3JAI|1|9|A|1781
3JAI|1|9|G|1782
3JAI|1|9|C|1783
3JAI|1|9|G|1784
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain GG
- eS6
Coloring options: