3D structure

PDB id
3JAI (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon
Experimental method
ELECTRON MICROSCOPY
Resolution
3.65 Å

Loop

Sequence
UACGCG*CCCCCA
Length
12 nucleotides
Bulged bases
3JAI|1|9|C|1437
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3JAI|1|9|U|1408
3JAI|1|9|A|1409
3JAI|1|9|C|1410
3JAI|1|9|G|1411
3JAI|1|9|C|1412
3JAI|1|9|G|1413
*
3JAI|1|9|C|1433
3JAI|1|9|C|1434
3JAI|1|9|C|1435
3JAI|1|9|C|1436
3JAI|1|9|C|1437
3JAI|1|9|A|1438

Current chains

Chain 9
18S ribosomal RNA

Nearby chains

Chain QQ
uS9
Chain TT
eS19
Chain UU
uS10

Coloring options:

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