IL_3JAJ_016
3D structure
- PDB id
- 3JAJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the engaged state of the mammalian SRP-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- GGA*UCCC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JAJ_016 not in the Motif Atlas
- Geometric match to IL_4N0T_004
- Geometric discrepancy: 0.3757
- The information below is about IL_4N0T_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_32983.1
- Basepair signature
- cWW-L-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
3JAJ|1|5|G|160
3JAJ|1|5|G|161
3JAJ|1|5|A|162
*
3JAJ|1|5|U|273
3JAJ|1|5|C|274
3JAJ|1|5|C|275
3JAJ|1|5|C|276
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain L
- Ribosomal protein eL13
- Chain N
- Ribosomal protein eL15
- Chain h
- Ribosomal protein uL29
- Chain i
- Ribosomal protein eL36
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