IL_3JAJ_042

3D structure

PDB id

3JAJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the engaged state of the mammalian SRP-ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

GAAGGU*GUUACAGC

Length

14 nucleotides

Bulged bases

3JAJ|1|5|G|748

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAJ|1|5|G|745
3JAJ|1|5|A|746
3JAJ|1|5|A|747
3JAJ|1|5|G|748
3JAJ|1|5|G|749
3JAJ|1|5|U|750
*
3JAJ|1|5|G|912
3JAJ|1|5|U|913
3JAJ|1|5|U|914
3JAJ|1|5|A|915
3JAJ|1|5|C|916
3JAJ|1|5|A|917
3JAJ|1|5|G|918
3JAJ|1|5|C|919

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain M

Ribosomal protein eL14

Chain S

Ribosomal protein eL20