3D structure

PDB id
3JAJ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the engaged state of the mammalian SRP-ribosome complex
Experimental method
ELECTRON MICROSCOPY
Resolution
3.75 Å

Loop

Sequence
GGCCAC*GAGGGGC
Length
13 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3JAJ|1|5|G|1074
3JAJ|1|5|G|1075
3JAJ|1|5|C|1076
3JAJ|1|5|C|1077
3JAJ|1|5|A|1078
3JAJ|1|5|C|1079
*
3JAJ|1|5|G|1221
3JAJ|1|5|A|1222
3JAJ|1|5|G|1232
3JAJ|1|5|G|1233
3JAJ|1|5|G|1234
3JAJ|1|5|G|1235
3JAJ|1|5|C|1236

Current chains

Chain 5
28S ribosomal RNA

Nearby chains

Chain C
Ribosomal protein uL4
Chain E
Ribosomal protein eL6
Chain F
Ribosomal protein uL30

Coloring options:

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