IL_3JAJ_108

3D structure

PDB id

3JAJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the engaged state of the mammalian SRP-ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

GGGUC*GGCGCCUAGC

Length

15 nucleotides

Bulged bases

3JAJ|1|5|U|3595, 3JAJ|1|5|A|3596

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAJ|1|5|G|2901
3JAJ|1|5|G|2902
3JAJ|1|5|G|2903
3JAJ|1|5|U|2904
3JAJ|1|5|C|2905
*
3JAJ|1|5|G|3589
3JAJ|1|5|G|3590
3JAJ|1|5|C|3591
3JAJ|1|5|G|3592
3JAJ|1|5|C|3593
3JAJ|1|5|C|3594
3JAJ|1|5|U|3595
3JAJ|1|5|A|3596
3JAJ|1|5|G|3597
3JAJ|1|5|C|3598

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain R

Ribosomal protein eL19

Chain SI

Ribosomal protein eS8

Chain SL

Ribosomal protein uS17