IL_3JAJ_248

3D structure

PDB id

3JAJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the engaged state of the mammalian SRP-ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

CGGGUCCG*CGGCCG

Length

14 nucleotides

Bulged bases

3JAJ|1|5|C|485

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAJ|1|5|C|480
3JAJ|1|5|G|481
3JAJ|1|5|G|482
3JAJ|1|5|G|483
3JAJ|1|5|U|484
3JAJ|1|5|C|485
3JAJ|1|5|C|486
3JAJ|1|5|G|487
*
3JAJ|1|5|C|669
3JAJ|1|5|G|670
3JAJ|1|5|G|671
3JAJ|1|5|C|672
3JAJ|1|5|C|673
3JAJ|1|5|G|674

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain r

Ribosomal protein eL28