IL_3JAJ_263
3D structure
- PDB id
- 3JAJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the engaged state of the mammalian SRP-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- CAGUCGAGAGUGGACGGGAGCGGCGGGGGCGGCGCGCGCGCG*CCCCCGGAGCCCCGCGGACGCUACG
- Length
- 67 nucleotides
- Bulged bases
- 3JAJ|1|5|U|2090, 3JAJ|1|5|A|2093, 3JAJ|1|5|G|2111, 3JAJ|1|5|G|2114, 3JAJ|1|5|G|2115, 3JAJ|1|5|C|2116, 3JAJ|1|5|C|2119, 3JAJ|1|5|G|2122, 3JAJ|1|5|C|2123, 3JAJ|1|5|G|2124, 3JAJ|1|5|C|2248, 3JAJ|1|5|C|2249, 3JAJ|1|5|C|2256, 3JAJ|1|5|G|2259, 3JAJ|1|5|C|2260, 3JAJ|1|5|U|2267, 3JAJ|1|5|C|2269
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JAJ|1|5|C|2087
3JAJ|1|5|A|2088
3JAJ|1|5|G|2089
3JAJ|1|5|U|2090
3JAJ|1|5|C|2091
3JAJ|1|5|G|2092
3JAJ|1|5|A|2093
3JAJ|1|5|G|2094
3JAJ|1|5|A|2095
3JAJ|1|5|G|2096
3JAJ|1|5|U|2097
3JAJ|1|5|G|2098
3JAJ|1|5|G|2099
3JAJ|1|5|A|2100
3JAJ|1|5|C|2101
3JAJ|1|5|G|2102
3JAJ|1|5|G|2103
3JAJ|1|5|G|2104
3JAJ|1|5|A|2105
3JAJ|1|5|G|2106
3JAJ|1|5|C|2107
3JAJ|1|5|G|2108
3JAJ|1|5|G|2109
3JAJ|1|5|C|2110
3JAJ|1|5|G|2111
3JAJ|1|5|G|2112
3JAJ|1|5|G|2113
3JAJ|1|5|G|2114
3JAJ|1|5|G|2115
3JAJ|1|5|C|2116
3JAJ|1|5|G|2117
3JAJ|1|5|G|2118
3JAJ|1|5|C|2119
3JAJ|1|5|G|2120
3JAJ|1|5|C|2121
3JAJ|1|5|G|2122
3JAJ|1|5|C|2123
3JAJ|1|5|G|2124
3JAJ|1|5|C|2125
3JAJ|1|5|G|2126
3JAJ|1|5|C|2127
3JAJ|1|5|G|2128
*
3JAJ|1|5|C|2246
3JAJ|1|5|C|2247
3JAJ|1|5|C|2248
3JAJ|1|5|C|2249
3JAJ|1|5|C|2250
3JAJ|1|5|G|2251
3JAJ|1|5|G|2252
3JAJ|1|5|A|2253
3JAJ|1|5|G|2254
3JAJ|1|5|C|2255
3JAJ|1|5|C|2256
3JAJ|1|5|C|2257
3JAJ|1|5|C|2258
3JAJ|1|5|G|2259
3JAJ|1|5|C|2260
3JAJ|1|5|G|2261
3JAJ|1|5|G|2262
3JAJ|1|5|A|2263
3JAJ|1|5|C|2264
3JAJ|1|5|G|2265
3JAJ|1|5|C|2266
3JAJ|1|5|U|2267
3JAJ|1|5|A|2268
3JAJ|1|5|C|2269
3JAJ|1|5|G|2270
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain C
- Ribosomal protein uL4
- Chain E
- Ribosomal protein eL6
- Chain F
- Ribosomal protein uL30
- Chain Q
- Ribosomal protein eL18
- Chain e
- Ribosomal protein eL32
- Chain r
- Ribosomal protein eL28
Coloring options: