IL_3JAJ_277

3D structure

PDB id

3JAJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the engaged state of the mammalian SRP-ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

GGCUC*GUGAGCU

Length

12 nucleotides

Bulged bases

3JAJ|1|5|G|4522, 3JAJ|1|5|A|4523

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAJ|1|5|G|4454
3JAJ|1|5|G|4455
3JAJ|1|5|C|4456
3JAJ|1|5|U|4457
3JAJ|1|5|C|4458
*
3JAJ|1|5|G|4520
3JAJ|1|5|U|4521
3JAJ|1|5|G|4522
3JAJ|1|5|A|4523
3JAJ|1|5|G|4524
3JAJ|1|5|C|4525
3JAJ|1|5|U|4526

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain 2

Nascent chain

Chain B

Ribosomal protein uL3

Chain V

Ribosomal protein uL14