IL_3JAJ_292
3D structure
- PDB id
- 3JAJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the engaged state of the mammalian SRP-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- AG*CGCGGUAAUUCCAGCU
- Length
- 18 nucleotides
- Bulged bases
- 3JAJ|1|S2|G|626, 3JAJ|1|S2|U|627, 3JAJ|1|S2|A|628
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JAJ|1|S2|A|599
3JAJ|1|S2|G|600
*
3JAJ|1|S2|C|622
3JAJ|1|S2|G|623
3JAJ|1|S2|C|624
3JAJ|1|S2|G|625
3JAJ|1|S2|G|626
3JAJ|1|S2|U|627
3JAJ|1|S2|A|628
3JAJ|1|S2|A|629
3JAJ|1|S2|U|630
3JAJ|1|S2|U|631
3JAJ|1|S2|C|632
3JAJ|1|S2|C|633
3JAJ|1|S2|A|634
3JAJ|1|S2|G|635
3JAJ|1|S2|C|636
3JAJ|1|S2|U|637
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SD
- Ribosomal protein uS3
- Chain SX
- Ribosomal protein uS12
- Chain Se
- Ribosomal protein eS30
Coloring options: