IL_3JAJ_297

3D structure

PDB id

3JAJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the engaged state of the mammalian SRP-ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

GGACGGCC*GAAUGUUUU

Length

17 nucleotides

Bulged bases

3JAJ|1|S2|U|1016

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAJ|1|S2|G|924
3JAJ|1|S2|G|925
3JAJ|1|S2|A|926
3JAJ|1|S2|C|927
3JAJ|1|S2|G|928
3JAJ|1|S2|G|929
3JAJ|1|S2|C|930
3JAJ|1|S2|C|931
*
3JAJ|1|S2|G|1010
3JAJ|1|S2|A|1011
3JAJ|1|S2|A|1012
3JAJ|1|S2|U|1013
3JAJ|1|S2|G|1014
3JAJ|1|S2|U|1015
3JAJ|1|S2|U|1016
3JAJ|1|S2|U|1017
3JAJ|1|S2|U|1018

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SB

Ribosomal protein eS1

Chain SN

Ribosomal protein uS15

Chain Sb

Ribosomal protein eS27