IL_3JAJ_317
3D structure
- PDB id
- 3JAJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the engaged state of the mammalian SRP-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- CGGGGUUUCGUACGU*AUUGAAAGUCAGCCCUCG
- Length
- 33 nucleotides
- Bulged bases
- 3JAJ|1|5|G|5041, 3JAJ|1|5|G|5049, 3JAJ|1|5|C|5054
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JAJ|1|5|C|4996
3JAJ|1|5|G|4997
3JAJ|1|5|G|4998
3JAJ|1|5|G|4999
3JAJ|1|5|G|5000
3JAJ|1|5|U|5001
3JAJ|1|5|U|5002
3JAJ|1|5|U|5003
3JAJ|1|5|C|5004
3JAJ|1|5|G|5005
3JAJ|1|5|U|5006
3JAJ|1|5|A|5007
3JAJ|1|5|C|5008
3JAJ|1|5|G|5009
3JAJ|1|5|U|5010
*
3JAJ|1|5|A|5038
3JAJ|1|5|U|5039
3JAJ|1|5|U|5040
3JAJ|1|5|G|5041
3JAJ|1|5|A|5042
3JAJ|1|5|A|5043
3JAJ|1|5|A|5044
3JAJ|1|5|G|5045
3JAJ|1|5|U|5046
3JAJ|1|5|C|5047
3JAJ|1|5|A|5048
3JAJ|1|5|G|5049
3JAJ|1|5|C|5050
3JAJ|1|5|C|5051
3JAJ|1|5|C|5052
3JAJ|1|5|U|5053
3JAJ|1|5|C|5054
3JAJ|1|5|G|5055
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain B
- Ribosomal protein uL3
- Chain W
- Ribosomal protein eL24
- Chain d
- Ribosomal protein eL31
Coloring options: