3D structure

PDB id
3JAM (explore in PDB, NAKB, or RNA 3D Hub)
Description
CryoEM structure of 40S-eIF1A-eIF1 complex from yeast
Experimental method
ELECTRON MICROSCOPY
Resolution
3.46 Å

Loop

Sequence
CCG*CAAG
Length
7 nucleotides
Bulged bases
3JAM|1|2|C|1635, 3JAM|1|2|A|1764
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_74275.1
Basepair signature
cWW-R-cWW
Number of instances in this motif group
11

Unit IDs

3JAM|1|2|C|1634
3JAM|1|2|C|1635
3JAM|1|2|G|1636
*
3JAM|1|2|C|1762
3JAM|1|2|A|1763
3JAM|1|2|A|1764
3JAM|1|2|G|1765

Current chains

Chain 2
18S rRNA

Nearby chains

Chain a
eS26

Coloring options:

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