IL_3JAP_100

3D structure

PDB id

3JAP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a partial yeast 48S preinitiation complex in closed conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

4.9 Å

Loop

Sequence

UAC*GAAUA

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAP|1|2|U|745
3JAP|1|2|A|746
3JAP|1|2|C|747
*
3JAP|1|2|G|801
3JAP|1|2|A|802
3JAP|1|2|A|803
3JAP|1|2|U|804
3JAP|1|2|A|805

Current chains

Chain 2

18S rRNA

Nearby chains

Chain H

eS7

Chain L

uS17

Chain W

uS8

Chain X

uS12