IL_3JCD_082

3D structure

PDB id

3JCD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CCUUGAUG*CUUUAAUG

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JCD|1|A|C|2103
3JCD|1|A|C|2104
3JCD|1|A|U|2105
3JCD|1|A|U|2106
3JCD|1|A|G|2107
3JCD|1|A|A|2108
3JCD|1|A|U|2109
3JCD|1|A|G|2110
*
3JCD|1|A|C|2179
3JCD|1|A|U|2180
3JCD|1|A|U|2181
3JCD|1|A|U|2182
3JCD|1|A|A|2183
3JCD|1|A|A|2184
3JCD|1|A|U|2185
3JCD|1|A|G|2186

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 5

50S ribosomal protein L1

Chain 9

Transfer RNA; tRNA