IL_3JCD_083

3D structure

PDB id

3JCD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GUGUAGGAUAGGUG*CACCC

Length

19 nucleotides

Bulged bases

3JCD|1|A|U|2111, 3JCD|1|A|U|2118

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JCD|1|A|G|2110
3JCD|1|A|U|2111
3JCD|1|A|G|2112
3JCD|1|A|U|2113
3JCD|1|A|A|2114
3JCD|1|A|G|2115
3JCD|1|A|G|2116
3JCD|1|A|A|2117
3JCD|1|A|U|2118
3JCD|1|A|A|2119
3JCD|1|A|G|2120
3JCD|1|A|G|2121
3JCD|1|A|U|2122
3JCD|1|A|G|2123
*
3JCD|1|A|C|2175
3JCD|1|A|A|2176
3JCD|1|A|C|2177
3JCD|1|A|C|2178
3JCD|1|A|C|2179

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 5

50S ribosomal protein L1

Chain 9

Transfer RNA; tRNA