IL_3JCD_152
3D structure
- PDB id
- 3JCD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GGC*GUCAUC
- Length
- 9 nucleotides
- Bulged bases
- 3JCD|1|a|C|1200, 3JCD|1|a|A|1201
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JCD_152 not in the Motif Atlas
- Geometric match to IL_3OXE_002
- Geometric discrepancy: 0.388
- The information below is about IL_3OXE_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61341.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
3JCD|1|a|G|1057
3JCD|1|a|G|1058
3JCD|1|a|C|1059
*
3JCD|1|a|G|1198
3JCD|1|a|U|1199
3JCD|1|a|C|1200
3JCD|1|a|A|1201
3JCD|1|a|U|1202
3JCD|1|a|C|1203
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain c
- 30S ribosomal protein S3
- Chain j
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S14
Coloring options: