IL_3JCD_211

3D structure

PDB id

3JCD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GAAGGGAGUAA*UUGCUCAUUGAC

Length

23 nucleotides

Bulged bases

3JCD|1|a|A|451

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JCD|1|a|G|450
3JCD|1|a|A|451
3JCD|1|a|A|452
3JCD|1|a|G|453
3JCD|1|a|G|454
3JCD|1|a|G|455
3JCD|1|a|A|456
3JCD|1|a|G|457
3JCD|1|a|U|458
3JCD|1|a|A|459
3JCD|1|a|A|460
*
3JCD|1|a|U|472
3JCD|1|a|U|473
3JCD|1|a|G|474
3JCD|1|a|C|475
3JCD|1|a|U|476
3JCD|1|a|C|477
3JCD|1|a|A|478
3JCD|1|a|U|479
3JCD|1|a|U|480
3JCD|1|a|G|481
3JCD|1|a|A|482
3JCD|1|a|C|483

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain p

30S ribosomal protein S16