IL_3JCT_086

3D structure

PDB id

3JCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-em structure of eukaryotic pre-60S ribosomal subunits

Experimental method

ELECTRON MICROSCOPY

Resolution

3.08 Å

Loop

Sequence

UUAGUCC*GCUAG

Length

12 nucleotides

Bulged bases

3JCT|1|1|U|2771, 3JCT|1|1|C|2772

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JCT|1|1|U|2767
3JCT|1|1|U|2768
3JCT|1|1|A|2769
3JCT|1|1|G|2770
3JCT|1|1|U|2771
3JCT|1|1|C|2772
3JCT|1|1|C|2773
*
3JCT|1|1|G|2787
3JCT|1|1|C|2788
3JCT|1|1|U|2789
3JCT|1|1|A|2790
3JCT|1|1|G|2791

Current chains

Chain 1

RDN25-1 rRNA

Nearby chains

Chain L

60S ribosomal protein L13-A

Chain a

60S ribosomal protein L28